Janice Louie, MPH, MD

Associate Clin Prof Volunteer
Medicine

 I am the Medical Director of the San Francisco Department of Public Health (SFDPH) Tuberculosis Clinic at Ward 94 located at Zuckerberg San Francisco General Hospital. In addition to overseeing the clinical team in San Francisco, I also have experience working overseas in tuberculosis surveillance. I am board-certified in internal medicine and infectious diseases and continue to consult on infectious diseases at the San Francisco Veterans Administration Medical Center. I have a 15+ year history of working in infectious diseases and public health at an international, national, state and local level. San Francisco has one of the highest incidence rates of tuberculosis in California at ~13/100,000 (>4 times higher than the national rate). I love working at the SFDPH Tuberculosis Clinic, where our mission is to evaluate and manage or co-manage all cases of active tuberculosis in San Francisco. We average over 100 cases annually, as well as manage and provide expert consultation on patients with multi-drug resistance and complicated or difficult-to-treat latent tuberculosis infection. We participate in multiple collaborative training and research endeavors with our partners at UCSF, the Centers for Disease Control and Prevention, the California Department of Public Health TB Control Branch, and the Curry International Tuberculosis Center.

Publications: 

Experience With Four-Month Rifapentine and Moxifloxacin-Based Tuberculosis Treatment in San Francisco.

Open forum infectious diseases

Louie JK, Agraz-Lara R, Velásquez GE, Phillips A, Szumowski JD

A teenage girl with altered mental status and paraparesis.

Journal of Clinical Tuberculosis and Other Mycobacterial Diseases

Miyakawa R, Louie J, Keh C, Chen L, Javid B, Ernst JD, Goswami N, Chow FC

Uniting for Ukraine Tuberculosis Screening Experience, San Francisco, California, USA.

Emerging infectious diseases

Louie JK, Agraz-Lara R, Romo L, Deiterich C, Xing C, Graves S

Latent Tuberculosis Infection Treatment: Still a Long Road Ahead.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Keh C

Adverse Events Associated with Treatment for Pan-susceptible Tuberculosis in San Francisco.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Keh C, Agraz-Lara R, Phillips A, Graves S

Tuberculosis-Associated Hospitalizations and Deaths after COVID-19 Shelter-In-Place, San Francisco, California, USA.

Emerging infectious diseases

Louie JK, Agraz-Lara R, Romo L, Crespin F, Chen L, Graves S

Lessons From Mass-Testing for Coronavirus Disease 2019 in Long-Term Care Facilities for the Elderly in San Francisco.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Scott HM, DuBois A, Sturtz N, Lu W, Stoltey J, Masinde G, Cohen S, Sachdev D, Philip S, Bobba N, Aragon T, San Francisco Department of Public Health COVID-19 Skilled Nursing Facility Outbreak Response Team

Comparison of symptomatic and asymptomatic infections due to severe acute respiratory coronavirus virus 2 (SARS-CoV-2) in San Francisco long-term care facilities.

Infection control and hospital epidemiology

Louie JK, Stoltey JE, Scott HM, Trammell S, Ememu E, Samuel MC, Aragon TJ, Masinde G

Timely intervention and control of a novel coronavirus (COVID-19) outbreak at a large skilled nursing facility-San Francisco, California, 2020.

Infection control and hospital epidemiology

Karmarkar EN, Blanco I, Amornkul PN, DuBois A, Deng X, Moonan PK, Rubenstein BL, Miller DA, Kennedy I, Yu J, Dauterman JP, Ongpin M, Hathaway W, Hoo L, Trammell S, Dosunmu EF, Yu G, Khwaja Z, Lu W, Talai NZ, Jain S, Louie JK, Philip SS, Federman S, Masinde G, Wadford DA, Bobba N, Stoltey J, Smith A, Epson E, Chiu CY, Bennett AS, Vasquez AM, Williams T

COVID-19-Associated Deaths in San Francisco: the Important Role of Dementia and Atypical Presentations in Long-term Care Facilities.

Journal of general internal medicine

Louie JK, Scott HM, Lu W, Chodos A, DuBois A, Sturtz N, Stoltey J

Early COVID-19 Successes in Skilled Nursing Facilities in San Francisco.

Journal of the American Geriatrics Society

Louie JK, Stoltey J, Scott HM, DuBois A, Golden L, Philip S, Aragón TJ

Outcomes of infants born to women with influenza A(H1N1)pdm09.

Birth defects research

Newsome K, Alverson CJ, Williams J, McIntyre AF, Fine AD, Wasserman C, Lofy KH, Acosta M, Louie JK, Jones-Vessey K, Stanfield V, Yeung A, Rasmussen SA

Neuraminidase Inhibitors and Influenza Infection-Reply.

JAMA internal medicine

Louie JK, Lampiris H

Pregnancy and severe influenza infection in the 2013-2014 influenza season.

Obstetrics and gynecology

Louie JK, Salibay CJ, Kang M, Glenn-Finer RE, Murray EL, Jamieson DJ

Fatal meningococcal disease in a laboratory worker--California, 2012.

MMWR. Morbidity and mortality weekly report

Sheets CD, Harriman K, Zipprich J, Louie JK, Probert WS, Horowitz M, Prudhomme JC, Gold D, Mayer L

Influenza-associated intensive-care unit admissions and deaths - California, September 29, 2013-January 18, 2014.

MMWR. Morbidity and mortality weekly report

Ayscue P, Murray E, Uyeki T, Zipprich J, Harriman K, Salibay C, Kang M, Luu A, Glenn-Finer R, Watt J, Glaser C, Louie J, Centers for Disease Control and Prevention (CDC)

Neuraminidase inhibitors for critically ill children with influenza.

Pediatrics

Louie JK, Yang S, Samuel MC, Uyeki TM, Schechter R

Epidemiology and outcomes of adults with asthma who were hospitalized or died with 2009 pandemic influenza A (H1N1)--California, 2009.

Influenza and other respiratory viruses

Mortensen E, Louie J, Pertowski C, Cadwell BL, Weiss E, Acosta M, Matyas BT

Reply to Kadhiravan.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie J, Yang S, Schechter R

Treatment with neuraminidase inhibitors for critically ill patients with influenza A (H1N1)pdm09.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Yang S, Acosta M, Yen C, Samuel MC, Schechter R, Guevara H, Uyeki TM

Use of intravenous peramivir for treatment of severe influenza A(H1N1)pdm09.

PloS one

Louie JK, Yang S, Yen C, Acosta M, Schechter R, Uyeki TM

A population-based study of neurologic manifestations of severe influenza A(H1N1)pdm09 in California.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Glaser CA, Winter K, DuBray K, Harriman K, Uyeki TM, Sejvar J, Gilliam S, Louie JK

Infants hospitalized in intensive care units with 2009 H1N1 influenza infection, California, 2009-2010.

The Pediatric infectious disease journal

Yen CJ, Louie JK, Schechter R

Role of real-time reverse transcription polymerase chain reaction for detection of respiratory viruses in critically ill children with respiratory disease: Is it time for a change in algorithm?

Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies

Aramburo A, van Schaik S, Louie J, Boston E, Messenger S, Wright C, Lawrence Drew W

Pandemic 2009 influenza A (H1N1) in 71 critically ill pregnant women in California.

American journal of obstetrics and gynecology

Ellington SR, Hartman LK, Acosta M, Martinez-Romo M, Rubinson L, Jamieson DJ, Louie J

A review of adult mortality due to 2009 pandemic (H1N1) influenza A in California.

PloS one

Louie JK, Jean C, Acosta M, Samuel MC, Matyas BT, Schechter R

2009 pandemic influenza A (H1N1) and vaccine failure in pregnancy.

Obstetrics and gynecology

Louie JK, Wadford DA, Norman A, Jamieson DJ

Characteristics of patients with oseltamivir-resistant pandemic (H1N1) 2009, United States.

Emerging infectious diseases

Graitcer SB, Gubareva L, Kamimoto L, Doshi S, Vandermeer M, Louie J, Waters C, Moore Z, Sleeman K, Okomo-Adhiambo M, Marshall SA, St George K, Pan CY, LaPlante JM, Klimov A, Fry AM

A novel risk factor for a novel virus: obesity and 2009 pandemic influenza A (H1N1).

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Acosta M, Samuel MC, Schechter R, Vugia DJ, Harriman K, Matyas BT, California Pandemic (H1N1) Working Group

Epidemiology of 2009 pandemic influenza A (H1N1) deaths in the United States, April-July 2009.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Fowlkes AL, Arguin P, Biggerstaff MS, Gindler J, Blau D, Jain S, Dhara R, McLaughlin J, Turnipseed E, Meyer JJ, Louie JK, Siniscalchi A, Hamilton JJ, Reeves A, Park SY, Richter D, Ritchey MD, Cocoros NM, Blythe D, Peters S, Lynfield R, Peterson L, Anderson J, Moore Z, Williams R, McHugh L, Cruz C, Waters CL, Page SL, McDonald CK, Vandermeer M, Waller K, Bandy U, Jones TF, Bullion L, Vernon V, Lofy KH, Haupt T, Finelli L

HIV-infected hospitalized patients with 2009 pandemic influenza A (pH1N1)--United States, spring and summer 2009.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Peters PJ, Skarbinski J, Louie JK, Jain S, New York City Department of Health Swine Flu Investigation Team, Roland M, Jani SG, Finelli L, Brooks JT

2009 pandemic influenza A (H1N1) virus infection in postpartum women in California.

American journal of obstetrics and gynecology

Louie JK, Jamieson DJ, Rasmussen SA

Children hospitalized with 2009 novel influenza A(H1N1) in California.

Archives of pediatrics & adolescent medicine

Louie JK, Gavali S, Acosta M, Samuel MC, Winter K, Jean C, Glaser CA, Matyas BT, Schechter R, California Pandemic (H1N1) Working Group

Molecular epidemiology and brief history of emerging adenovirus 14-associated respiratory disease in the United States.

The Journal of infectious diseases

Kajon AE, Lu X, Erdman DD, Louie J, Schnurr D, George KS, Koopmans MP, Allibhai T, Metzgar D

Invasive group A streptococcal infection concurrent with 2009 H1N1 influenza.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Jean C, Louie JK, Glaser CA, Harriman K, Hacker JK, Aranki F, Bancroft E, Farley S, Ginsberg M, Hernandez LB, Sallenave CS, Radner AB

Rapid influenza antigen test for diagnosis of pandemic (H1N1) 2009.

Emerging infectious diseases

Louie JK, Guevara H, Boston E, Dahlke M, Nevarez M, Kong T, Schechter R, Glaser CA, Schnurr DP

Pandemic 2009 influenza A(H1N1) virus illness among pregnant women in the United States.

JAMA

Siston AM, Rasmussen SA, Honein MA, Fry AM, Seib K, Callaghan WM, Louie J, Doyle TJ, Crockett M, Lynfield R, Moore Z, Wiedeman C, Anand M, Tabony L, Nielsen CF, Waller K, Page S, Thompson JM, Avery C, Springs CB, Jones T, Williams JL, Newsome K, Finelli L, Jamieson DJ, Pandemic H1N1 Influenza in Pregnancy Working Group

Severe 2009 H1N1 influenza in pregnant and postpartum women in California.

The New England journal of medicine

Louie JK, Acosta M, Jamieson DJ, Honein MA, California Pandemic (H1N1) Working Group

Factors associated with death or hospitalization due to pandemic 2009 influenza A(H1N1) infection in California.

JAMA

Louie JK, Acosta M, Winter K, Jean C, Gavali S, Schechter R, Vugia D, Harriman K, Matyas B, Glaser CA, Samuel MC, Rosenberg J, Talarico J, Hatch D, California Pandemic (H1N1) Working Group

Hospitalized patients with 2009 H1N1 influenza in the United States, April-June 2009.

The New England journal of medicine

Jain S, Kamimoto L, Bramley AM, Schmitz AM, Benoit SR, Louie J, Sugerman DE, Druckenmiller JK, Ritger KA, Chugh R, Jasuja S, Deutscher M, Chen S, Walker JD, Duchin JS, Lett S, Soliva S, Wells EV, Swerdlow D, Uyeki TM, Fiore AE, Olsen SJ, Fry AM, Bridges CB, Finelli L, 2009 Pandemic Influenza A (H1N1) Virus Hospitalizations Investigation Team

Pandemic influenza: implications for programs controlling for HIV infection, tuberculosis, and chronic viral hepatitis.

American journal of public health

Heffelfinger JD, Patel P, Brooks JT, Calvet H, Daley CL, Dean HD, Edlin BR, Gensheimer KF, Jereb J, Kent CK, Lennox JL, Louie JK, Lynfield R, Peters PJ, Pinckney L, Spradling P, Voetsch AC, Fiore A

H1N1 2009 influenza virus infection during pregnancy in the USA.

Lancet (London, England)

Jamieson DJ, Honein MA, Rasmussen SA, Williams JL, Swerdlow DL, Biggerstaff MS, Lindstrom S, Louie JK, Christ CM, Bohm SR, Fonseca VP, Ritger KA, Kuhles DJ, Eggers P, Bruce H, Davidson HA, Lutterloh E, Harris ML, Burke C, Cocoros N, Finelli L, MacFarlane KF, Shu B, Olsen SJ, Novel Influenza A (H1N1) Pregnancy Working Group

Re-emergence of another vaccine-preventable disease?-Two cases of rubella in older adults.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology

Louie JK, Shaikh-Laskos R, Preas C, Nguyen VT, Peters A, Messenger S

Meningitis due to a "Bartonella washoensis"-like human pathogen.

Journal of clinical microbiology

Probert W, Louie JK, Tucker JR, Longoria R, Hogue R, Moler S, Graves M, Palmer HJ, Cassady J, Fritz CL

5' noncoding region alone does not unequivocally determine genetic type of human rhinovirus strains.

Journal of clinical microbiology

Savolainen-Kopra C, Blomqvist S, Smura T, Roivainen M, Hovi T, Kiang D, Kalra I, Yagi S, Louie JK, Boushey H, Boothby J, Schnurr DP

Rhinovirus associated with severe lower respiratory tract infections in children.

The Pediatric infectious disease journal

Louie JK, Roy-Burman A, Guardia-Labar L, Boston EJ, Kiang D, Padilla T, Yagi S, Messenger S, Petru AM, Glaser CA, Schnurr DP

Identification of cardioviruses related to Theiler's murine encephalomyelitis virus in human infections.

Proceedings of the National Academy of Sciences of the United States of America

Chiu CY, Greninger AL, Kanada K, Kwok T, Fischer KF, Runckel C, Louie JK, Glaser CA, Yagi S, Schnurr DP, Haggerty TD, Parsonnet J, Ganem D, DeRisi JL

Assay for 5' noncoding region analysis of all human rhinovirus prototype strains.

Journal of clinical microbiology

Kiang D, Kalra I, Yagi S, Louie JK, Boushey H, Boothby J, Schnurr DP

Increased detection of meningococcal infections in california using a polymerase chain reaction assay.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Cummings KC, Louie J, Probert WS, Killoran PB, Schechter R, Mohle-Boetani JC, Vugia DJ, Backer H, Rosenberg J

Severe pneumonia due to adenovirus serotype 14: a new respiratory threat?

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Kajon AE, Holodniy M, Guardia-LaBar L, Lee B, Petru AM, Hacker JK, Schnurr DP

Risk factors for West Nile virus neuroinvasive disease, California, 2005.

Emerging infectious diseases

Jean CM, Honarmand S, Louie JK, Glaser CA

Creating a model program for influenza surveillance in California: results from the 2005-2006 influenza season.

American journal of preventive medicine

Louie JK, Schnurr DP, Guevara HF, Honarmand S, Cheung M, Cottam D, Yeh E, Wold L, Boston EJ, Tang J, Cummings KC, Donovan RM, Schechter R, Rosenberg J, Walter LJ, Chapman JA, Brenner PR, Baxter RP, Glaser CA

A summer outbreak of human metapneumovirus infection in a long-term-care facility.

The Journal of infectious diseases

Louie JK, Schnurr DP, Pan CY, Kiang D, Carter C, Tougaw S, Ventura J, Norman A, Belmusto V, Rosenberg J, Trochet G

Molecular characterization of a variant rhinovirus from an outbreak associated with uncommonly high mortality.

Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology

Kiang D, Yagi S, Kantardjieff KA, Kim EJ, Louie JK, Schnurr DP

Severe pediatric influenza in California, 2003-2005: implications for immunization recommendations.

Pediatrics

Louie JK, Schechter R, Honarmand S, Guevara HF, Shoemaker TR, Madrigal NY, Woodfill CJ, Backer HD, Glaser CA

High prevalence of HIV and sexually transmitted infections among indirect sex workers in Cambodia.

Sexually transmitted diseases

Kim AA, Sun LP, Chhorvann C, Lindan C, Van Griensven F, Kilmarx PH, Sirivongrangson P, Louie JK, Leng HB, Page-Shafer K

Characterization of viral agents causing acute respiratory infection in a San Francisco University Medical Center Clinic during the influenza season.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Hacker JK, Gonzales R, Mark J, Maselli JH, Yagi S, Drew WL

Rhinovirus outbreak in a long term care facility for elderly persons associated with unusually high mortality.

Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

Louie JK, Yagi S, Nelson FA, Kiang D, Glaser CA, Rosenberg J, Cahill CK, Schnurr DP

Opportunistic infections in hospitalized HIV-infected adults in Ho Chi Minh City, Vietnam: a cross-sectional study.

International journal of STD & AIDS

Louie JK, Chi NH, Thao le TT, Quang VM, Campbell J, Chau NV, Rutherford GW, Farrar JJ, Parry CM

Barriers to Creutzfeldt-Jakob disease autopsies, California.

Emerging infectious diseases

Louie JK, Gavali SS, Belay ED, Trevejo R, Hammond LH, Schonberger LB, Vugia DJ

SARS and common viral infections.

Emerging infectious diseases

Louie JK, Hacker JK, Mark J, Gavali SS, Yagi S, Espinosa A, Schnurr DP, Cossen CK, Isaacson ER, Glaser CA, Fischer M, Reingold AL, Vugia DJ, Unexplained Deaths and Critical Illnesses Working Group